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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs111988830 chr14:24666856 C/T 4.19E-10 472 15.65 16.83 13.85 KM Plot
THCA rs111993073 chr16:14009068 G/C 0 487 15.23 18.83 10.3 KM Plot
THCA rs112022196 chr14:59734612 G/C 2.92E-8 476 16.33 13.1 5.45 KM Plot
THCA rs112029677 chr11:45025383 G/A 0.000138 481 14.93 19.73 12.1 KM Plot
THCA rs11203009 chr10:90927163 G/A 0.000311 482 15.33 17.85 14.47 KM Plot
THCA rs112030580 chr1:41558441 A/G 3.69E-12 488 17.7 17.75 14.93 KM Plot
THCA rs112046582 chr3:38013763 G/A 0.000133 487 15.97 14.92 24.67 KM Plot
THCA rs11205454 chr1:48672427 G/A 7.18E-5 481 17.1 13.8 9.57 KM Plot
THCA rs11205457 chr1:48681886 A/C 6.14E-5 490 17.02 13.82 7.82 KM Plot
THCA rs11205469 chr1:48770567 C/T 7.41E-5 488 17.68 14.8 14.9 KM Plot
THCA rs112069023 chr10:105034518 C/T 1.54E-7 479 15.23 18.18 21.13 KM Plot
THCA rs11206959 chr1:40301266 T/C 0.000173 487 15.9 15.95 14.3 KM Plot
THCA rs112088642 chr1:156914240 CCATTCATT/C 2.02E-7 477 16.87 15.68 11.48 KM Plot
THCA rs11209376 chr1:41498348 G/A 0.000138 487 17.7 17.73 14.92 KM Plot
THCA rs11209379 chr1:41500081 A/G 3.73E-12 489 17.7 17.73 14.92 KM Plot